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Affiliation Department |
Department of Life Science and Applied Chemistry
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Title |
Professor |
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External Link |
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KANDORI Hideki
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Degree
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Master of Science ( Kyoto University )
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Doctor of Science ( Kyoto University )
Research Areas
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Life Science / Biophysics
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Life Science / Functional biochemistry
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Nanotechnology/Materials / Bio chemistry
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Natural Science / Biophysics, chemical physics and soft matter physics
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Nanotechnology/Materials / Fundamental physical chemistry
From School
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Kyoto University Faculty of Science Graduated
- 1984.03
Country：Japan
From Graduate School
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Kyoto University Graduate School, Division of Natural Science Doctor's Course Completed
- 1989.03
Country：Japan
External Career
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科学技術庁基礎科学特別研究員 研究員
1992.04 - 1993.03
Country：Japan
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Research Fellow of the Japan Society for the Promotion of Science Special researcher of the Japan Society for the Promotion of Science
1988.04 - 1990.03
Country：Japan
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Graduate School of Science, Kyoto University Research Assistant
1993.04 - 1998.03
Country：Japan
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Graduate School of Science, Kyoto University Lecturer
1999.04 - 2001.03
Country：Japan
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豊田理化学研究所奨励研究員 研究員
1990.04 - 1991.03
Country：Japan
Professional Memberships
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日本生物物理学会
1984.04
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分子科学会
2006.09
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日本化学会
1990.04
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International Conference on Retinal Proteins
1996.04
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分子科学研究奨励森野基金
2020.01
Research Career
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Mechanism of Light-Signal Conversion in Photoreceptive Proteins
(not selected)
Project Year：
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Mechanism of Light-Energy Conversion in Photoreceptive Proteins
(not selected)
Project Year：
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Development in Infrared Spectroscopy through the Rhodopsin Study
(not selected)
Project Year：
Papers
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Highly sensitive visual restoration and protection via ectopic expression of chimeric rhodopsin in mice Reviewed International coauthorship
Y. Katada, K. Yoshida, N. Serizawa, D. Lee, K. Kobayashi, K. Negishi, H. Okano, H. Kandori, K. Tsubota, T. Kurihara
iScience 26 ( 10 ) 107716 2023.10
Language：English Publishing type：Research paper (scientific journal)
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Spectroscopic investigation of Na+-dependent conformational changes of a cyclobutane pyrimidine dimer-repairing deoxyribozyme Reviewed
T. Iwata, Y. Kurahashi, I Made Mahaputra Wijaya, H. Kandori
ACS Omega 8 ( 40 ) 37274 - 37281 2023.09
Language：English Publishing type：Research paper (scientific journal)
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Structural basis for ion selectivity in potassium-selective channelrhodopsins Reviewed International coauthorship
S. Tajima, Y. S. Kim, M. Fukuda, Y. Jo, P. Y. Wang, J. M. Paggi, M. Inoue, E. F. X. Byrne, K. E. Kishi, S. Nakamura, C. Ramakrishnan, S. Takaramoto, T. Nagata, M. Konno, M. Sugiura, K. Katayama, T. E. Matsui, K. Yamashita, S. Kim, H. Ikeda, J. Kim, H. Kandori, R. O. Dror, K. Inoue, K. Deisseroth*, H. E. Kato*
Cell 186 ( 20 ) 4325 - 4344.e26. 2023.09
Language：English Publishing type：Research paper (scientific journal)
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Structural basis for the allosteric modulation of rhodopsin by nanobody binding to its extracellular domain Reviewed International coauthorship
A. Wu, D. Salom, J. D. Hong, A. Tworak, K. Watanabe, E. Pardon, J. Steyaert, H. Kandori, K. Katayama*, P. D. Kiser*, K. Palczewski*
Nat. Commun. 14 ( 1 ) 5209 2023.08
Language：English Publishing type：Research paper (scientific journal)
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Light-Driven Chloride and Sulfate Pump with Two Different Transport Modes Reviewed
M. Singh, S. Ito, S. Hososhima, R. Abe-Yoshizumi, S. P. Tsunoda, K. Inoue, H. Kandori*
J. Phys. Chem B. 127 ( 32 ) 7123 - 7134 2023.08
Language：English Publishing type：Research paper (scientific journal)
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Optogenetic manipulation of neuronal and cardiomyocyte functions in zebrafish using microbial rhodopsins and adenylyl cyclases Reviewed International coauthorship
H. Hagio, W. Koyama, S. Hosaka, A. Deniz Song, J. Narantsatsral, K. Matsuda, T. Shimizu, S. Hososhima, S. P. Tsunoda, H. Kandori, M. Hibi*
eLife 12 e83975 2023.08
Language：English Publishing type：Research paper (scientific journal)
DOI： 10.7554/eLife.83975
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Investigating the Mechanism of Photoisomerization in Jellyfish Rhodopsin with the Counterion at an Atypical Position Reviewed
S. Inukai, K. Katayama*, M Koyanagi, A. Terakita, H. Kandori*
Journal of Biological Chemistry, 299 ( 6 ) 104726 2023.05
Language：English Publishing type：Research paper (scientific journal)
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A light-gated cation channel with high reactivity to weak light Reviewed
S. Hososhima, S. Ueno, S. Okado, K. Inoue, M. Konno, Y. Yamauchi, K. Inoue, H. Terasaki, H. Kandori, S. P. Tsunoda*
Scientific Reports, 13 ( 1 ) 7625 2023.05
Language：English Publishing type：Research paper (scientific journal)
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Difference FTIR Spectroscopy of Jumping Spider Rhodopsin-1 at 77 K Reviewed
S. Hanai, T. Nagata, K. Katayama, S. Inukai, M. Koyanagi, K. Inoue, A. Terakita, H. Kandori*
Biochemistry 62 ( 8 ) 1347 - 1359 2023.04
Language：English Publishing type：Research paper (scientific journal)
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Protein dynamics of a light-driven Na+ pump rhodopsin probed using a tryptophan residue near the retinal chromophore Reviewed
A. Otomo, M. Mizuno, K. Inoue, H. Kandori, Y. Mizutani*
Biophys. PhysicoBiol. 20 e201016 2023.03
Language：English Publishing type：Research paper (scientific journal)
Books and Other Publications
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Purification of the Na+-Driven PomAB Stator Complex and Its Analysis Using ATR-FTIR Spectroscopy
S. Kojima, M. Homma, H. Kandori（ Role： Joint author）
Springer 2023.02
Responsible for pages：chaptere9 95-107 Language：eng Book type：Scholarly book
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Functional assay of light-induced ion-transport by rhodopsins.
S. Hososhima, R. Abe-Yoshizumi, H Kandori*（ Role： Joint author）
Elsevier, Methods in Enzymology 2022.09
Language：eng
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光異性化と生命現象
-（ Role： Joint editor）
朝倉書店 2016.02
Language：jpn Book type：Dictionary, encyclopedia
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バクテリオロドプシン
-（ Role： Joint editor）
朝倉書店 2016.02
Language：jpn Book type：Dictionary, encyclopedia
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History and perspectives of light-sensing proteins
H. Kandori（ Role： Sole author）
Elsevier 2015.04
Language：eng
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Protein-controlled isomerization in rhodopsins
H. Kandori（ Role： Sole author）
Elsevier 2015.04
Language：eng
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高次π空間の創発と機能開発
赤阪 健、大須賀篤弘、福住俊一、神取秀樹（ Role： Joint editor）
シーエムシー出版 2013.04
Language：jpn Book type：Scholarly book
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オプトジェネティックス
神取秀樹（ Role： Joint editor）
エヌ・ティー・エス出版 2013.04
Language：jpn Book type：Scholarly book
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“Protein-Controlled Ultrafast Photoisomerization in Rhodopsin and Bacteriorhodopsin” in "Supramolecular Effects on Photochemical and Photophysical Processes"
H. Kandori（ Role： Sole author）
John Wiley & Sons, Inc. 2011.06
Language：eng Book type：Scholarly book
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“Supramolecular Effects on Mechanisms of Photoisomerization: Hula-Twist, Bicycle-Pedal and One-Bond-Flip” in "Supramolecular Effects on Photochemical and Photophysical Processes"
R. S. H. Liu, L.-Y. Yang, Y.-P. Zhao, A. Kawanabe and H. Kandori（ Role： Joint author）
John Wiley & Sons, Inc. 2011.06
Language：eng Book type：Scholarly book
Misc
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Ion Transport Activity Assay for Microbial Rhodopsin Expressed in Escherichia coli Cells
M. Konno, K. Inoue*, H. Kandori*
11 ( 15 ) 2021.08
Authorship：Lead author Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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Microbial Rhodopsins: The Last Two Decades
A. Rozenberg, K. Inoue, H. Kandori, O. Béjà
75 427 - 447 2021.08
Language：English Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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私を驚かせてください
神取秀樹
2021.03
Authorship：Lead author Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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History and perspectives of light-sensing proteins
H. Kandori
1293 3 - 19 2021.01
Language：English Publishing type：Article, review, commentary, editorial, etc. (scientific journal) Publisher：Springer Nature
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Molecular properties and optogenetic applications of enzymerhodopsins
S. P. Tsunoda, M. Sugiura and H. Kandori
1293 153 - 165 2021.01
Language：English Publishing type：Article, review, commentary, editorial, etc. (scientific journal) Publisher：Springer Nature
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Structure/Function Study of Photoreceptive Proteins by FTIR Spectroscopy
H. Kandori
93 904 - 926 2020.07
Language：English Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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Biophysics of rhodopsins and optogenetics
H. Kandori
12 355 - 361 2020.04
Language：English Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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オプトジェネティクスツールとしてのロドプシン
神取秀樹
2020.04
Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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視覚の初期過程を捉えるための超高速分光
神取秀樹
60 127 - 129 2020.03
Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
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Novel optogenetics tool: Gt_CCR4 A light-gated cation channel with high-reactivity to weak light
S. Hososhima, S. Shigemura, H. Kandori, S. P. Tsunoda
12 453 - 459 2020.03
Language：English Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
Presentations
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Vibrational spectroscopy study of chemical interaction between κ-opioid receptor (KOR) and ligands having morphinan structure
R. Nishikawa, K. Katayama, S. Iwata, R. Suno, C. Suno, T. Kobayashi, H. Kandori
第97回日本薬理学会年会
Event date： 2023.12
Language：Japanese
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Structural complexity and dynamics in GPCRs revealed by vibrational spectroscopy
K. Katayama, Y. Sugiura, K. Suzuki, R. Suno, R. Kise, H. Tsujimoto, S. Iwata, A. Inoue, T. Kobayashi, H. Kandori
第97回日本薬理学会年会
Event date： 2023.12
Language：Japanese
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Spectroscopic study of molecular mechanisms regulating light-sensitivity and color tuning of a light-gated ion channel, GtCCR4
Y. Yamashita, T. Sugimoto, K. Katayama, S. P. Tsunoda,T. Tanaka, W. shihoya, O. Nureki, H. Kandori
第46回日本分子生物学会年会
Event date： 2023.12
Language：English
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A functional hotspot residue ,Asn404, controls the activation in M2 muscarinic receptor (M2R)
Y. Sugiura, K. Katayama, Y. Sumii, R. Suno, P. Binti Mohd Ariff, N. Shibata, H. Kandori
第46回日本分子生物学会年会
Event date： 2023.12
Language：English
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A functional hotspot residue ,Asn404, controls the activation in M2 muscarinic receptor (M2R)
Y. Sugiura, K. Katayama, Y. Sumii, R. Suno, P. Binti Mohd Ariff, N. Shibata, H. Kandori
第46回日本分子生物学会年会
Event date： 2023.12
Language：English
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Spectroscopic study of molecular mechanisms regulating light-sensitivity and color tuning of a light-gated ion channel, GtCCR5
Y. Yamashita, T. Sugimoto, K. Katayama, S. P. Tsunoda,T. Tanaka, W. shihoya, O. Nureki, H. Kandori
第46回日本分子生物学会年会
Event date： 2023.12
Language：English
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Structural features of Lumi intermediate on a primate blue-sensitive visual pigment revealed by FTIR International conference
Y. Mizuno, K. Katayama, H. Imai, H. Kandori
International symposium "Molecular Movies; to be continued"
Event date： 2023.11 - 2023.12
Language：English
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光遺伝学を支えるロドプシンの作動メカニズム
神取秀樹
第43回キャピラリー電気泳動シンポジウム
Event date： 2023.11 - 2023.12
Language：Japanese Presentation type：Oral presentation (invited, special)
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Vibrational spectroscopy analyses of ligand recognition and activation mechanisms in G-protein-coupled receptor International conference
K. Katayama, Y. Sugiura, K. Suzuki, R. Suno, R. Kise, H. Tsujimoto, S. Iwata, A. Inoue, T. Kobayashi, H. Kandori
International symposium "Molecular Movies; to be continued"
Event date： 2023.11 - 2023.12
Language：Japanese
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Crystal structure of V2HeR3, a Viral heliorhodopsin transporting proton International conference
R. Mizutori, N. Nuemket, S. Ohashi, E. Nango, K. Katayama, H. Kandori
International symposium "Molecular Movies; to be continued"
Event date： 2023.11 - 2023.12
Language：English
Industrial Property Rights
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光応答性タンパク質及びその利用
田代凛太郎、細島頌子、角田 聡、神取秀樹
Application no：特願2021-023873 Date applied：2021.02
Country of applicant：Domestic Country of acquisition：Domestic
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色識別のための光応答性タンパク質及びその利用
重村竣太、細島頌子、角田 聡、神取秀樹
Application no：特願2020-044713 Date applied：2019.03
Country of applicant：Domestic Country of acquisition：Domestic
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光応答性タンパク質及びその利用
重村竣太、細島頌子、角田 聡、神取秀樹
Application no：特願2018-172990 Date applied：2018.09
Country of applicant：Domestic Country of acquisition：Domestic
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ロドプシンホスホジエステーゼ
神取秀樹、角田 聡、吉田一帆
Application no：特願2017-174601 Date applied：2017.09
Country of applicant：Domestic Country of acquisition：Domestic
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Proton pump and its applications
Hideki Kandori, Keiichi Inoue
Application no：特願2016-173556 Date applied：2016.09
Country of applicant：Domestic Country of acquisition：Domestic
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視覚機能再生剤又は視覚機能低下予防剤
栗原 俊英、堅田 侑作、國見 洋光、坪田 一男、神取 秀樹
Application no：特願2016-172149 Date applied：2016.09
Country of applicant：Domestic Country of acquisition：Domestic
Awards
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紫綬褒章（生物物理学研究功績）
2021.04 内閣府
神取秀樹
Country：Japan
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第40回島津賞
2020.12 島津科学技術振興財団
神取秀樹
Award type：Award from publisher, newspaper, foundation, etc. Country：Japan
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第73回中日文化賞
2020.05 中日新聞社
神取秀樹
Award type：Award from publisher, newspaper, foundation, etc. Country：Japan
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第51回内藤記念科学振興賞
2020.03 内藤記念科学振興財団
神取秀樹
Award type：Award from publisher, newspaper, foundation, etc. Country：Japan
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第７１回日本化学会賞
2019.01 日本化学会
神取秀樹
Award type：Award from Japanese society, conference, symposium, etc. Country：Japan
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AOCP Award
2017.11 Asia and Oceania Society for Photobiology
神取秀樹
Award type：Award from international society, conference, symposium, etc. Country：Korea, Republic of
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分子科学会賞
2015.09 分子科学会
神取秀樹
Award type：Award from Japanese society, conference, symposium, etc. Country：Japan
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名古屋工業大学褒賞
2011.11 名古屋工業大学
神取秀樹
Country：Japan
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平成２３年度文部科学大臣表彰科学技術賞（研究部門）
2011.04 文部科学省
神取秀樹
Country：Japan
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名古屋工業大学褒賞
2010.03 名古屋工業大学
神取秀樹
Country：Japan
Committee Memberships
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日本生物物理学会 監事
2021.06 - 2023.06
Committee type：Academic society
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分子科学研究奨励森野基金 運営委員
2020.01
Committee type：Other
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日本生物物理学会 代議員
2019.06
Committee type：Academic society
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日本学術会議 連携会員
2017.10
Committee type：Other
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日本生物物理学会 会長
2017.06 - 2019.06
Committee type：Academic society
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分子科学会 副会長
2016.09 - 2018.09
Committee type：Academic society
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分子科学研究所運営会議 運営委員
2012.04 - 2016.03
Committee type：Other
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日本生物物理学会 運営委員
2012.01 - 2014.12
Committee type：Academic society
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日本化学会 物理化学ディビジョン幹事
2010.04 - 2012.03
Committee type：Academic society
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新世代研究所 水和ナノ構造研究会 研究会委員
2009.04 - 2012.03
Committee type：Other