KANDORI Hideki

写真a

Affiliation Department etc.

Department of Life Science and Applied Chemistry
Department of Life Science and Applied Chemistry

Title

Professor

Graduating School

  •  
    -
    1984.03

    Kyoto University   Faculty of Science   Graduated

Graduate School

  •  
    -
    1989.03

    Kyoto University  Graduate School, Division of Natural Science  Doctor's Course  Completed

Degree

  • Kyoto University -  Master of Science

  • Kyoto University -  Doctor of Science

External Career

  • 1999.04
    -
    2001.03

    Graduate School of Science, Kyoto University   Lecturer  

  • 1993.04
    -
    1998.03

    Graduate School of Science, Kyoto University   Research Assistant  

  • 1992.04
    -
    1993.03

      Researcher  

  • 1990.04
    -
    1991.03

      Researcher  

  • 1988.04
    -
    1990.03

    Research Fellow of the Japan Society for the Promotion of Science   Special researcher of the Japan Society for the Promotion of Science  

Field of expertise (Grants-in-aid for Scientific Research classification)

  • Biophysics

  • Biological physics/Chemical physics/Soft matter physics

  • Bio-related chemistry

  • Functional biochemistry

  • Structural biochemistry

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Research Career

  • Mechanism of Light-Signal Conversion in Photoreceptive Proteins

    Individual   (not selected)  

    Project Year:   - 

  • Development in Infrared Spectroscopy through the Rhodopsin Study

    Individual   (not selected)  

    Project Year:   - 

  • Mechanism of Light-Energy Conversion in Photoreceptive Proteins

    Individual   (not selected)  

    Project Year:   - 

Papers

  • FTIR analysis of a light-driven inward proton-pumping rhodopsin at 77 K

    S. Ito, S. Sugita, K. Inoue, H. Kandori*

    Photochem. and Photobiol.     2017.04  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • A unique choanoflagellate enzyme rhodopsin exhibits light-dependent cyclic nucleotide phosphodiesterase activity

    K. Yoshida, S. P. Tsunoda*, L. S. Brown, H. Kandori*

    J Biol Chem.     2017.03  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Solid-state NMR structural study of the retinal-binding pocket in sodium ion pump rhodopsin

    A. Shigeta, S. Ito, K. Inoue, T. Okitsu, A. Wada, H. Kandori, I. Kawamura*

    Biochemistry     2017.01  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Electron fate and repair efficiency in the mechanism of (6-4) photolyase-mediated DNA repair

    H. M. Dokainish, D. Yamada, T. Iwata, H. Kandori and A. Kitao*

    ACS Catal.     2017  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Spectral tuning mechanism of primate blue-sensitive visual pigment elucidated by FTIR spectroscopy

    K. Katayama, Y. Nonaka, K. Tsutsui, H. Imai, H. Kandori*

    Sci. Rep.     2017  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Functional characterization of sodium-pumping rhodopsins with different pumping properties

    S. P. Tsunoda, M. Prigge, R. Abe-Yoshizumi, K. Inoue, Y. Kozaki, T. Ishizuka, H. Yawo, O. Yizhar, H. Kandori*

    PLoS One.     2017  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Molecular properties of a DTD channelrhodopsin from Guillardia theta

    Y. Yamauchi, M. Konno, S. Ito, S. P. Tsunoda, K. Inoue, H. Kandori*

    Biophys. Physicobiol.     2017  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Hydrogen Bonding Environment of the N3-H Group of Flavin Mononucleotide in the Light Oxygen Voltage Domains of Phototropins

    T. Iwata, D. Nozaki, A. Yamamoto, T. Koyama, Y Nishina, K. Shiga, S. Tokutomi, M. Unno, H. Kandori*

    Biochemistry     2017  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Low-temperature FTIR spectroscopy provides evidence for protein-bound water molecules in eubacterial light-driven ion pumps

    Y. Nomura, S. Ito, M. Teranishi, H. Ono, K. Inoue, H. Kandori*

    Phys. Chem. Chem. Phys.     2017  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • A chimera Na+-pump rhodopsin as an effective optogenetic silence

    Hoque MR, Ishizuka T, Inoue K, Abe-Yoshizumi R, Igarashi H, Mishima T, Kandori H, Yawo H

    PLOS ONE     2016.11  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

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Books

  • History and perspectives of light-sensing proteins

    H. Kandori (Part: Single Author )

    Elsevier  2015.04

  • Protein-controlled isomerization in rhodopsins

    H. Kandori (Part: Single Author )

    Elsevier  2015.04

  • “Protein-Controlled Ultrafast Photoisomerization in Rhodopsin and Bacteriorhodopsin” in "Supramolecular Effects on Photochemical and Photophysical Processes"

    H. Kandori (Part: Single Author )

    John Wiley & Sons, Inc.   2011.06

  • “Supramolecular Effects on Mechanisms of Photoisomerization: Hula-Twist, Bicycle-Pedal and One-Bond-Flip” in "Supramolecular Effects on Photochemical and Photophysical Processes"

    R. S. H. Liu, L.-Y. Yang, Y.-P. Zhao, A. Kawanabe and H. Kandori (Part: Multiple Authorship )

    John Wiley & Sons, Inc.   2011.06

  • "Hydrogen Bonds of Protein-Bound Water Molecules in Rhodopsins" in "Hydrogen Bonding and Transfer in the Excited State"

    H. Kandori (Part: Multiple Authorship )

    John Wiley & Sons Ltd  2010.10

  • Progress in Retinal Research

    (Part: Single Author )

    1992.04

Review Papers

  • Conversion of microbial rhodopsins: insights into functionally essential elements and rational protein engineering

    A. Kaneko, K. Inoue, K. Kojima, H. Kandori, Y. Sudo*

    Biophys. Rev.     2017

    Introduction and explanation (scientific journal)   Multiple Authorship

  • The light-driven sodium ion pump: A new player in rhodopsin research.

    Kato HE, Inoue K, Kandori H, Nureki O.

    Bioessay     2016.06

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Light-driven ion-translocating rhodopsins in marine bacteria

    K. Inoue , Y. Kato, H. Kandori*

    Trends Microbiol.     2015.04

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Ion-pumping microbial rhodopsins

    H. Kandori

    Front. Mol. Biosci.     2015.04

    Introduction and explanation (scientific journal)   Single Author

  • FTIR study of primate color visual pigments

    K. Katayama , H. Kandori*

    BIOPHYSICS     2015.04

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Microbial and animal rhodopsins: Structuress, functions, and molecular mechansims

    O. P. Ernst, D. T. Lodowski, M. Elstner, P. Hegemann, L. S. Brown, H. Kandori

    Chem. Rev. ( Americal Chemical Society )    2014.01

    Introduction and explanation (international conference proceedings)   Multiple Authorship

  • Hydrogen-bonding changes of internal water molecules upon the actions of microbial rhodopsins studied by FTIR spectroscopy

    Y. Furutani, H. Kandori

    Biochim. Biophys. Acta ( Elsevier )    2013.09

    Introduction and explanation (scientific journal)   Multiple Authorship

  • FTIR spectroscopy of flavin-binding photoreceptors

    D. Yamada and H. Kandori

    Methods in Molecular Biology ( Springer )    2013.04

    Introduction and explanation (commerce magazine)   Multiple Authorship

  • Light-induced structural changes of the LOV2 domains in various phototropins revealed by FTIR spectroscopy

    T. Iwata, S. Tokutomi, and H. Kandori*

    BIOPHYSICS ( 日本生物物理学会 )  7   89 - 98   2012.01

    Introduction and explanation (international conference proceedings)   Multiple Authorship

  • An inward proton transport using Anabaena sensory rhodopsin

    A. Kawanabe, Y. Furutani, K.-H. Jung and H. Kandori

    J. Microbiol. ( The Microbiological Society of Korea )  49   1 - 6   2011.03

    Introduction and explanation (international conference proceedings)   Multiple Authorship

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Presentations

  • Spectroscopic study of photoreceptive proteins

    H. Kandori  [Invited]

    AOCP 2017, Award Lecture  2017.11  -  2017.11 

  • Spectral tuning mechanism of primate blue-sensitive visual pigment elucidated by FTIR spectroscopy

    K. Katayama Y. Nonaka, K. Tsutui, H. Imai, 〇H. Kandori

    8th Asia and Oceania Conference on Photobiology (AOCP2017)  2017.11  -  2017.11 

  • A light-driven chloride and sulfate pump from Bacillus aurantiacus

    〇M. Singh, S. Ito, S. Hososhima, R. Abe-Yoshizumi, S. P. Tsunoda, K. Inoue, H. Kandori

    8th Asia and Oceania Conference on Photobiology (AOCP2017)  2017.11  -  2017.11 

  • The spectroscopic study on the proton transport mechanism of inward proton pump rhodopsin, PoXeR

    〇K. Inoue, H. Kandori

    8th Asia and Oceania Conference on Photobiology (AOCP2017)  2017.11  -  2017.11 

  • Light-induced difference FTIR spectroscopy of photolyase

    D. Yamada, Y. Zhang, I M. M. Wijaya, T. Iwata, 〇H. Kandori

    8th Asia and Oceania Conference on Photobiology (AOCP2017)  2017.11  -  2017.11 

  • Gene Expression Analysis of Microbial Rhodopsin-Like Genes in Marine Cryptomonad

    〇M. Konno, Y. Yamauchi, K. Inoue, H. Kandor

    Taiwan-Japan Plant Biology 2017  2017.11  -  2017.11 

  • Regulation of actin bundles by using LOV-fused fascin

    〇I. Fujiwara, M. Iwatani, S. Tsunoda, H. Kandori

    Optogenetics research society Japan, 9th symposium  2017.10  -  2017.10 

  • Electrophysiological characterization of light-driven Na+ pump (KR2) from marine bacteria

    〇S. Hososhima, S. Tsunoda, H. Kandori

    Optogenetics research society Japan, 9th symposium  2017.10  -  2017.10 

  • Functional Characterization of Rhodopsin-Guanylate Cyclase - A potential Optogenetics Tool For cGMP Modulation

    〇S. Tsunoda, K. Yoshida, H. Kandori

    Optogenetics research society Japan, 9th symposium  2017.10  -  2017.10 

  • The role of histidine and carboxylate residues for zinc inhibition in the voltage-gated proton channel Hv1/VSOP

    〇M. Iwaki, K. Takeshita, H. Arima, Y. Okamura, A. Nakagawa, H. Kandori

    The 55th Annual Meeting of the Biophysical Society of Japan  2017.09  -  2017.09 

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Industrial Property

  • Proton pump and its applications

    特願 特願2016-173556 

    Proton pump and its applications