KANDORI Hideki

写真a

Affiliation Department etc.

Department of Life Science and Applied Chemistry
Department of Life Science and Applied Chemistry

Title

Professor

Graduating School

  •  
    -
    1984.03

    Kyoto University   Faculty of Science   Graduated

Graduate School

  •  
    -
    1989.03

    Kyoto University  Graduate School, Division of Natural Science  Doctor's Course  Completed

Degree

  • Kyoto University -  Master of Science

  • Kyoto University -  Doctor of Science

External Career

  • 1999.04
    -
    2001.03

    Graduate School of Science, Kyoto University   Lecturer  

  • 1993.04
    -
    1998.03

    Graduate School of Science, Kyoto University   Research Assistant  

  • 1992.04
    -
    1993.03

      Researcher  

  • 1990.04
    -
    1991.03

      Researcher  

  • 1988.04
    -
    1990.03

    Research Fellow of the Japan Society for the Promotion of Science   Special researcher of the Japan Society for the Promotion of Science  

Field of expertise (Grants-in-aid for Scientific Research classification)

  • Biophysics

  • Biological physics/Chemical physics/Soft matter physics

  • Bio-related chemistry

  • Functional biochemistry

  • Structural biochemistry

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Research Career

  • Mechanism of Light-Signal Conversion in Photoreceptive Proteins

    Individual   (not selected)  

    Project Year:   - 

  • Development in Infrared Spectroscopy through the Rhodopsin Study

    Individual   (not selected)  

    Project Year:   - 

  • Mechanism of Light-Energy Conversion in Photoreceptive Proteins

    Individual   (not selected)  

    Project Year:   - 

Papers

  • A chimera Na+-pump rhodopsin as an effective optogenetic silence

    Hoque MR, Ishizuka T, Inoue K, Abe-Yoshizumi R, Igarashi H, Mishima T, Kandori H, Yawo H

    PLOS ONE     2016.11  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Natural light-driven inward proton pump

    Inoue K, Ito S, Kato Y, Nomura Y, Shibata M, Uchihashi T, Tsunoda S, Kandori H

    Nat. Commun.     2016.11  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Directional Electron Transfer in Crystals of [CrCo] Dinuclear Complexes Achieved by Chirality-Assisted Preparative Method.

    Kanegawa S, Shiota Y, Kang S, Takahashi K, Okajima H, Sakamoto A, Iwata T, Kandori H, Yoshizawa K, Sato O.

    J Am Chem Soc.     2016.11  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Towards Automatic Rhodopsin Modeling as a Tool for High-throughput Computational Photobiology.

    Melaccio F, Del Carmen Marín M, Valentini A, Montisci F, Rinaldi S, Cherubini M, Yang X, Kato Y, Stenrup M, Orozco-Gonzalez Y, Ferré N, Luk HL, Kandori H, Olivucci M.

    J Chem Theory Comput.     2016.10  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Role of Asn112 in a Light-Driven Sodium Ion-Pumping Rhodopsin.

    Abe-Yoshizumi R, Inoue K, Kato HE, Nureki O, Kandori H.

    Biochemistry     2016.10  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • The photochemistry of sodium ion pump rhodopsin observed by watermarked femto- to submillisecond stimulated Raman spectroscopy.

    Hontani Y, Inoue K, Kloz M, Kato Y, Kandori H, Kennis JT.

    Phys Chem Chem Phys     2016.09  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Functional Conversion of CPD and (6-4) Photolyases by Mutation.

    Yamada D, Dokainish HM, Iwata T, Yamamoto J, Ishikawa T, Todo T, Iwai S, Getzoff ED, Kitao A, Kandori H.

    Biochemistry     2016.08  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Single hydrogen bond donation from flavin N5 to proximal asparagine ensures FAD reduction in DNA photolyase

    I M. Mahaputra Wijaya, T. Domratcheva, T. Iwata, E. D. Getzoff, H. Kandori*

    J. Am. Chem. Soc.     2016.03  [Refereed]

    Research paper (other science council materials etc.)   Multiple Authorship

  • Asymmetric functional conversion of eubacterial light-driven ion pumps

    K. Inoue, Y. Nomura, H. Kandori*

    J. Biol. Chem.     2016.02  [Refereed]

    Research paper (other science council materials etc.)   Multiple Authorship

  • Structural changes of the active center during the photoactivation of Xenopus (6-4) photolyase

    D. Yamada, J. Yamamoto, Y. Zhang, T. Iwata, K. Hitomi, E. D. Getzoff, S. Iwai, H. Kandori*

    Biochemistry     2016.02  [Refereed]

    Research paper (other science council materials etc.)   Multiple Authorship

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Books

  • History and perspectives of light-sensing proteins

    H. Kandori (Part: Single Author )

    Elsevier  2015.04

  • Protein-controlled isomerization in rhodopsins

    H. Kandori (Part: Single Author )

    Elsevier  2015.04

  • “Protein-Controlled Ultrafast Photoisomerization in Rhodopsin and Bacteriorhodopsin” in "Supramolecular Effects on Photochemical and Photophysical Processes"

    H. Kandori (Part: Single Author )

    John Wiley & Sons, Inc.   2011.06

  • “Supramolecular Effects on Mechanisms of Photoisomerization: Hula-Twist, Bicycle-Pedal and One-Bond-Flip” in "Supramolecular Effects on Photochemical and Photophysical Processes"

    R. S. H. Liu, L.-Y. Yang, Y.-P. Zhao, A. Kawanabe and H. Kandori (Part: Multiple Authorship )

    John Wiley & Sons, Inc.   2011.06

  • "Hydrogen Bonds of Protein-Bound Water Molecules in Rhodopsins" in "Hydrogen Bonding and Transfer in the Excited State"

    H. Kandori (Part: Multiple Authorship )

    John Wiley & Sons Ltd  2010.10

  • Progress in Retinal Research

    (Part: Single Author )

    1992.04

Review Papers

  • The light-driven sodium ion pump: A new player in rhodopsin research.

    Kato HE, Inoue K, Kandori H, Nureki O.

    Bioessay     2016.06

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Light-driven ion-translocating rhodopsins in marine bacteria

    K. Inoue , Y. Kato, H. Kandori*

    Trends Microbiol.     2015.04

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Ion-pumping microbial rhodopsins

    H. Kandori

    Front. Mol. Biosci.     2015.04

    Introduction and explanation (scientific journal)   Single Author

  • FTIR study of primate color visual pigments

    K. Katayama , H. Kandori*

    BIOPHYSICS     2015.04

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Microbial and animal rhodopsins: Structuress, functions, and molecular mechansims

    O. P. Ernst, D. T. Lodowski, M. Elstner, P. Hegemann, L. S. Brown, H. Kandori

    Chem. Rev. ( Americal Chemical Society )    2014.01

    Introduction and explanation (international conference proceedings)   Multiple Authorship

  • Hydrogen-bonding changes of internal water molecules upon the actions of microbial rhodopsins studied by FTIR spectroscopy

    Y. Furutani, H. Kandori

    Biochim. Biophys. Acta ( Elsevier )    2013.09

    Introduction and explanation (scientific journal)   Multiple Authorship

  • FTIR spectroscopy of flavin-binding photoreceptors

    D. Yamada and H. Kandori

    Methods in Molecular Biology ( Springer )    2013.04

    Introduction and explanation (commerce magazine)   Multiple Authorship

  • Light-induced structural changes of the LOV2 domains in various phototropins revealed by FTIR spectroscopy

    T. Iwata, S. Tokutomi, and H. Kandori*

    BIOPHYSICS ( 日本生物物理学会 )  7   89 - 98   2012.01

    Introduction and explanation (international conference proceedings)   Multiple Authorship

  • An inward proton transport using Anabaena sensory rhodopsin

    A. Kawanabe, Y. Furutani, K.-H. Jung and H. Kandori

    J. Microbiol. ( The Microbiological Society of Korea )  49   1 - 6   2011.03

    Introduction and explanation (international conference proceedings)   Multiple Authorship

  • Protein-Protein Interaction Changes in an Archaeal Light-Signal Transduction

    H. Kandori, Y. Sudo and Y. Furutani

    J. Biomed. Biotech. ( Hindawi Publishing Corporation )  ( 426760 )   2010.06

    Introduction and explanation (scientific journal)   Multiple Authorship

Presentations

  • Light-driven ion-pump activity of native marine bacteria

    Yuichi Hashimoto, Rei Abe-Yoshizumi, Yoshitaka Kato, Keiichi Inoue, Hideki Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Functional conversion of eubacterial pump rhodopsins and the investigation of the molecular mechanism

    Yurika Nomura, Keiichi Inoue , Shota Ito, Hideki Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Molecular functions of rhodopsin-like proteins from Guillardia theta

    Y.Yamauchi, M.Konno, Y.Kato, S.Tsunoda, K.Inoue, H.Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Transport mechanism of NaRs studied by electrophysiology measurement

    Y. Kozaki, K. Inoue, R. Abe-Yoshizumi, S. Tsunoda, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Microbial rhodopsins with unique photoreaction

    Y. Kato, K. Inoue, S. Ito, S. Tsunoda, Y. Nomura, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Analysis of a hydrogen bonding network of the BLUF domain using isotope-labeled samples

    T. Nagai, T. Iwata, S. Ito, M. Iseki, M. Watanabe, M. Unno, S. Kitagawa, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Electrophysiological study of cation channelrhodopsins from cryptophyte algae

    S. Tsunoda, Y. Yamauchi, M. Konno, K. Inoue, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Role of His30 in Na+/H+ Hybrid Pumping Rhodopsin KR2

    S. Tomida, S. Ito, R. Abe-Yoshizumi, K. Inoue, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Oligomerization of light-driven sodium pump KR2 is important for ion transport activity

    R. Abe-Yoshizumi, S. Ito, M. Shibata, K. Inoue, T. Uchihashi, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

  • Artificial photosynthesis based on the engineered flavoprotein LOV

    N. Ueda, Y. Ono, T. Iwata, M. Iwaki, H. Kandori

    The 54th Annual Meeting of the Biophysical Society of Japan  2016.11  -  2016.11 

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