KANDORI Hideki

写真a

Affiliation Department etc.

Department of Life Science and Applied Chemistry
Department of Life Science and Applied Chemistry
Opto-Biotechnology Research Center

Title

Professor

Graduating School

  •  
    -
    1984.03

    Kyoto University   Faculty of Science   Graduated

Graduate School

  •  
    -
    1989.03

    Kyoto University  Graduate School, Division of Natural Science  Doctor's Course  Completed

Degree

  • Kyoto University -  Master of Science

  • Kyoto University -  Doctor of Science

External Career

  • 1999.04
    -
    2001.03

    Graduate School of Science, Kyoto University   Lecturer  

  • 1993.04
    -
    1998.03

    Graduate School of Science, Kyoto University   Research Assistant  

  • 1992.04
    -
    1993.03

      Researcher  

  • 1990.04
    -
    1991.03

      Researcher  

  • 1988.04
    -
    1990.03

    Research Fellow of the Japan Society for the Promotion of Science   Special researcher of the Japan Society for the Promotion of Science  

Field of expertise (Grants-in-aid for Scientific Research classification)

  • Biophysics

  • Biological physics/Chemical physics/Soft matter physics

  • Basic chemistry

  • Bio-related chemistry

  • Structural biochemistry

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Research Career

  • Mechanism of Light-Signal Conversion in Photoreceptive Proteins

    Individual   (not selected)  

    Project Year:   - 

  • Development in Infrared Spectroscopy through the Rhodopsin Study

    Individual   (not selected)  

    Project Year:   - 

  • Mechanism of Light-Energy Conversion in Photoreceptive Proteins

    Individual   (not selected)  

    Project Year:   - 

Papers

  • Structural changes during the photorepair and binding processes of Xenopus (6–4) photolyase with (6–4) photoproducts in single- and double-stranded DNA

    D. Yamada, J. Yamamoto, E. D. Getzoff, T. Iwata*, H. Kandori*

    Biochemistry   60 ( 43 ) 3253 - 3261   2021.11  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • A Unified View on Varied Ultrafast Dynamics of the Primary Process in Microbial Rhodopsins

    C.-F. Chang, H. Kuramochi, M. Singh, R. Abe-Yoshizumi, T. Tsukuda, H. Kandori, T. Tahara*

    Angew. Chem. Int. Ed.     2021.10  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Strongly hydrogen-bonded Schiff base and adjoining polyene twisting in the retinal chromophore of schizorhodopsins

    T. Shionoya, M. Singh, M. Mizuno, H. Kandori, Y. Mizutani*

    Biochemistry   60 ( 41 ) 3050 - 3057   2021.10  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Pro219 is an electrostatic color determinant in the light-driven sodium pump KR2

    Y. Nakajima, L. P. -González, L. Barneschi, K. Inoue, M. Olivucci*, H. Kandori*

    Commun. Biol.   4 ( 1185 )   2021.10  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Orientations and water dynamics of photoinduced secondary charge-separated states for magnetoreception by cryptochrome

    M. Hamada, T. Iwata*, M. Fukui, H. Kandori, S. Weber*, Y. Kobori*

    Commun. Chem.   4 ( 141 )   2021.09  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Ion transport activity and optogenetics capability of light-driven Na+-pump KR2

    S. Hososhima, H. Kandori, S. P. Tsunoda*

    PLoS ONE   16 ( 9 ) e0256728 - e0256728   2021.09  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Remote control of neural function by X-ray-induced scintillation

    T. Matsubara, T. Yanagida, N. Kawaguchi, T. Nakano, J. Yoshimoto, M. Sezaki, H. Takizawa, S. P. Tsunoda, S. Horigane, S. Ueda, S. Takemoto-Kimura, H. Kandori, A. Yamanaka, T. Yamashita*

    Nat. Commun.   12 ( 4478 )   2021.07  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Inverse Hydrogen-Bonding Change Between the Protonated Retinal Schiff Base and Water Molecules upon Photoisomerization in Heliorhodopsin 48C12

    S. Tomida, S. Kitagawa, H. Kandori*, Y. Furutani*

    J. Phys. Chem. B   125 ( 30 ) 8331 - 8341   2021.07  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Resonance Raman Determination of Chromophore Structures of Heliorhodopsin Photointermediates

    T. Urui, M. Mizuno, A. Otomo, H. Kandori, Y. Mizutani*

    J. Phys. Chem. B   125 ( 26 ) 7155 - 7162   2021.06  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

  • Role of Thr82 for the unique photochemistry of TAT rhodopsin

    T. Sugimoto, K. Katayama, H. Kandori*

    Biophys. Physicobiol.   18   108 - 115   2021.04  [Refereed]

    Research paper (scientific journal)   Multiple Authorship

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Books

  • History and perspectives of light-sensing proteins

    H. Kandori (Part: Single Author )

    Elsevier  2015.04

  • Protein-controlled isomerization in rhodopsins

    H. Kandori (Part: Single Author )

    Elsevier  2015.04

  • “Protein-Controlled Ultrafast Photoisomerization in Rhodopsin and Bacteriorhodopsin” in "Supramolecular Effects on Photochemical and Photophysical Processes"

    H. Kandori (Part: Single Author )

    John Wiley & Sons, Inc.   2011.06

  • “Supramolecular Effects on Mechanisms of Photoisomerization: Hula-Twist, Bicycle-Pedal and One-Bond-Flip” in "Supramolecular Effects on Photochemical and Photophysical Processes"

    R. S. H. Liu, L.-Y. Yang, Y.-P. Zhao, A. Kawanabe and H. Kandori (Part: Multiple Authorship )

    John Wiley & Sons, Inc.   2011.06

  • "Hydrogen Bonds of Protein-Bound Water Molecules in Rhodopsins" in "Hydrogen Bonding and Transfer in the Excited State"

    H. Kandori (Part: Multiple Authorship )

    John Wiley & Sons Ltd  2010.10

  • Progress in Retinal Research

    (Part: Single Author )

    1992.04

Review Papers

  • Microbial Rhodopsins: The Last Two Decades

    A. Rozenberg, K. Inoue, H. Kandori, O. Béjà

    Annu. Rev. Microbiol   75   427 - 447   2021.08

    Introduction and explanation (scientific journal)   Multiple Authorship

  • History and perspectives of light-sensing proteins

    H. Kandori

    Optogenetics, Adv Exp Med Biol ( Springer Nature )  1293   3 - 19   2021.01

    Introduction and explanation (scientific journal)   Single Author

  • Molecular properties and optogenetic applications of enzymerhodopsins

    S. P. Tsunoda, M. Sugiura and H. Kandori

    Optogenetics, Adv Exp Med Biol ( Springer Nature )  1293   153 - 165   2021.01

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Structure/Function Study of Photoreceptive Proteins by FTIR Spectroscopy

    H. Kandori

    Bull. Chem. Soc. Jpn .   93   904 - 926   2020.07

    Introduction and explanation (scientific journal)   Single Author

  • Biophysics of rhodopsins and optogenetics

    H. Kandori

    Biophys. Rev.   12   355 - 361   2020.04

    Introduction and explanation (scientific journal)   Single Author

  • Novel optogenetics tool: Gt_CCR4 A light-gated cation channel with high-reactivity to weak light

    S. Hososhima, S. Shigemura, H. Kandori, S. P. Tsunoda

    Biophys. Rev.   12   453 - 459   2020.03

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Retinal Proteins: Photochemistry and Optogenetics

    H. Kandori

    Bulletin of the Chemical Society of Japan   93   76 - 85   2020.01

    Introduction and explanation (bulletin of university, research institution)   Single Author

  • Light-induced difference FTIR spectroscopy of photoreceptive proteins

    H. Kandori, K. Katayama

    Vibrational Spectroscopy in Protein Research: From Purified Proteins to Aggregates and Assemblies (Y. Ozaki, M. Baranska, I. Lednev, B. R. Wood, eds) ( Elsevier )    2019

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Light-driven sodium-pumping rhodopsin: a new concept of active transport

    H. Kandori*, K. Inoue, S. P. Tsunoda

    Chem. Rev.   118 ( 21 ) 10646 - 10658   2018.11

    Introduction and explanation (scientific journal)   Multiple Authorship

  • Complex molecular systems: a frontier of molecular science

    T. Tahara, A. Kitao, Y. Mizutani, H. Kandori, M. Fujii

    Phys Chem Chem Phys.   20 ( 5 ) 2945 - 2946   2018.01

    Introduction and explanation (scientific journal)   Multiple Authorship

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Presentations

  • Time-resolved spectroscopic analysis on structural changes during the transportation process of sodium pump rhodopsin KR2

    S. Tomida, A. Wada, H. Kandori, Y. Furutani

    Pacifichem 2021  2021.12  -  2021.12 

  • Molecular properties of novel Rh-PDEs

    M. Sugiura, S. P. Tsunoda, M. Hibi, H. Kandori

    Pacifichem 2021  2021.12  -  2021.12 

  • Calcium selectivity and optogenetics application of a deep blue absorbing channelrhodopsin

    S. Tsunoda, R. Tashiro, S. Hososhima, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • FTIR study of Drosophila Rh7, a light and bitter taste sensor

    K. Watanabe, K. Katayama, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • Electrophysiological analysis of inward and outward proton pump rhodopsins

    A. Okuyama, S. Hososhima, S. Tsunoda, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • ATR-FTIR study of ligand recognition on kappa opioid receptor

    S. Iwata, K. Suzuki, K. Katayama, R. Suno, C. Suno, T. Kobayashi, K. Tsujimoto, S. Iwata, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • Activity analysis of near-infrared light absorbing enzyme rhodopsin

    K. Ishikawa, S. Hososhima, M. Sugiura, Leonid S. Brown, S. Tsunoda, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • Time-dependent light-induced ATR-FTIR study of viral rhodopsin OLPVRⅠ in the presence of different cations

    M. Aoyama, K. Katayama, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • Mechanism of anomalous pH-dependent color change in blue-proteorhodopsin from Vibrio caribbeanicus

    M. Sumikawa, R. Yoshizumi, T. Uchihashi, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

  • Ca2+ sensing function of TAT rhodopsin

    T. Sugimoto, K. Katayama, H. Kandori

    The 59th Annual Meeting of the Biophysical Society of Japan  2021.11  -  2021.11 

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Industrial Property

  • Proton pump and its applications

    特願 特願2016-173556 

    Proton pump and its applications